Reworked some refactor organization

Added somewhaat backwards compatavbility through Mono.Cecil

IPA.Loader/IPA.Loader.csproj

@@ -51,7 +51,7 @@
     </Reference>
   </ItemGroup>
   <ItemGroup>
-    <Compile Include="BeatSaber\CompositeBSPlugin.cs" />
+    <Compile Include="IllusionInjector\BeatSaber\CompositeBSPlugin.cs" />
     <Compile Include="IllusionPlugin\BeatSaber\IBeatSaberPlugin.cs" />
     <Compile Include="IllusionPlugin\BeatSaber\IEnhancedBeatSaberPlugin.cs" />
     <Compile Include="IllusionPlugin\BeatSaber\ModsaberModInfo.cs" />
@@ -63,23 +63,23 @@
     <Compile Include="IllusionPlugin\Logging\LogPrinter.cs" />
     <Compile Include="IllusionPlugin\ModPrefs.cs" />
     <Compile Include="IllusionPlugin\Utils\ReflectionUtil.cs" />
-    <Compile Include="IPA\CompositeIPAPlugin.cs" />
-    <Compile Include="Logging\Printers\ColoredConsolePrinter.cs" />
-    <Compile Include="Logging\Printers\GlobalLogFilePrinter.cs" />
-    <Compile Include="Logging\Printers\GZFilePrinter.cs" />
-    <Compile Include="Logging\Printers\PluginLogFilePrinter.cs" />
-    <Compile Include="Logging\StandardLogger.cs" />
-    <Compile Include="Logging\UnityLogInterceptor.cs" />
-    <Compile Include="PluginComponent.cs" />
-    <Compile Include="PluginManager.cs" />
+    <Compile Include="IllusionInjector\IPA\CompositeIPAPlugin.cs" />
+    <Compile Include="IllusionInjector\Logging\Printers\ColoredConsolePrinter.cs" />
+    <Compile Include="IllusionInjector\Logging\Printers\GlobalLogFilePrinter.cs" />
+    <Compile Include="IllusionInjector\Logging\Printers\GZFilePrinter.cs" />
+    <Compile Include="IllusionInjector\Logging\Printers\PluginLogFilePrinter.cs" />
+    <Compile Include="IllusionInjector\Logging\StandardLogger.cs" />
+    <Compile Include="IllusionInjector\Logging\UnityLogInterceptor.cs" />
+    <Compile Include="IllusionInjector\PluginComponent.cs" />
+    <Compile Include="IllusionInjector\PluginManager.cs" />
     <Compile Include="Properties\AssemblyInfo.cs" />
-    <Compile Include="Updating\Backup\BackupUnit.cs" />
-    <Compile Include="Updating\ModsaberML\ApiEndpoint.cs" />
-    <Compile Include="Updating\ModsaberML\Updater.cs" />
-    <Compile Include="Updating\SelfPlugin.cs" />
-    <Compile Include="Utilities\Extensions.cs" />
-    <Compile Include="Utilities\LoneFunctions.cs" />
-    <Compile Include="Utilities\SteamCheck.cs" />
+    <Compile Include="IllusionInjector\Updating\Backup\BackupUnit.cs" />
+    <Compile Include="IllusionInjector\Updating\ModsaberML\ApiEndpoint.cs" />
+    <Compile Include="IllusionInjector\Updating\ModsaberML\Updater.cs" />
+    <Compile Include="IllusionInjector\Updating\SelfPlugin.cs" />
+    <Compile Include="IllusionInjector\Utilities\Extensions.cs" />
+    <Compile Include="IllusionInjector\Utilities\LoneFunctions.cs" />
+    <Compile Include="IllusionInjector\Utilities\SteamCheck.cs" />
   </ItemGroup>
   <ItemGroup>
     <PackageReference Include="Ionic.Zip">

IPA.Loader/PluginManager.cs → IPA.Loader/IllusionInjector/PluginManager.cs

@@ -3,6 +3,7 @@ using IllusionInjector.Updating;
 using IllusionInjector.Utilities;
 using IllusionPlugin;
 using IllusionPlugin.BeatSaber;
+using Mono.Cecil;
 using System;
 using System.Collections.Generic;
 using System.Diagnostics;
@@ -176,6 +177,18 @@ namespace IllusionInjector
 
             try
             {
+                var module = ModuleDefinition.ReadModule(file);
+                bool modifiedModule = false;
+                foreach (var @ref in module.AssemblyReferences)
+                {
+                    if (@ref.Name == "IllusionPlugin" || @ref.Name == "IllusionInjector")
+                    {
+                        @ref.Name = "IPA.Loader";
+                        modifiedModule = true;
+                    }
+                }
+                if (modifiedModule) module.Write(file);
+
                 Assembly assembly = Assembly.LoadFrom(file);
 
                 foreach (Type t in assembly.GetTypes())